Assoc. Prof. HİLAL ÖZKILINÇ

Publication Network

Journal articles indexed in SCI, SSCI, and AHCI 24

1. Resistance evolution and local adaptation of Venturia inaequalis to old and new generation SDHI fungicides

ÖZKILINÇ H., Fidanoğlu B. T., Öncel S., Kurtuluş E., Kadıoğlu İ. E.

Fungal Biology , vol.129, no.2, 2025 (SCI-Expanded)

2. A Model System for Understanding Host–Pathogen Relationships Through In Vitro Host Mimicry

Fidanoğlu B. T., Keresteci N., Özkılınç H.

EUROPEAN JOURNAL OF PLANT PATHOLOGY , vol.1, no.1, pp.1-12, 2025 (SCI-Expanded)

3. Discovering the dynamics of peach fruit mycobiome throughout fruit development season by high-throughput sequencing

Öncel S., Özkılınç H.

SCIENTIFIC REPORTS , vol.15, no.1, pp.1-13, 2025 (SCI-Expanded)

4. Transposable elements in genomic architecture of Monilinia fungal phytopathogens and TE-driven DMI-resistance adaptation

Durak M. R., Özkılınç H.

MOBILE DNA , vol.16, no.1, pp.1-14, 2025 (SCI-Expanded)

5. MicroRNA cross-talk between Monilinia fungal pathogens and peach host

Arslan K., Özkılınç H.

PHYTOPARASITICA , vol.52, no.29, pp.1-16, 2024 (SCI-Expanded)

6. A case study of the effect of temperature on aggressiveness in the Monilinia-peach pathosystem

Fidanoğlu B. T., MESTAV B., ÖZKILINÇ H.

European Journal of Plant Pathology , vol.167, no.1, pp.1-10, 2023 (SCI-Expanded) Sustainable Development

7. Genome-Wide Discovery of Structural Variants Reveals Distinct Variant Dynamics for Two Closely Related Monilinia Species

DURAK M. G., ÖZKILINÇ H.

GENOME BIOLOGY AND EVOLUTION , vol.15, no.6, 2023 (SCI-Expanded) Sustainable Development

8. Phylogenetic divergences in brown rot fungal pathogens of Monilinia species from a worldwide collection: inferences based on the nuclear versus mitochondrial genes

Silan E., Ozkilinc H.

BMC ECOLOGY AND EVOLUTION , vol.22, no.119, pp.1-12, 2022 (SCI-Expanded)

9. Genetic diversity assessments of brown rot pathogen Monilinia fructicola based on the six simple sequence repeat loci

GÜVEN H., Everhart S. E., De Miccolis Angelini R. M., ÖZKILINÇ H.

JOURNAL OF PLANT DISEASES AND PROTECTION , vol.128, no.6, pp.1459-1465, 2021 (SCI-Expanded)

10. A novel approach for in vitro fungicide screening and the sensitivity of Monilinia populations from peach orchards in Turkey to respiratory inhibitor fungicides

Durak M. R., Arslan K., Silan E., Yildiz G., ÖZKILINÇ H.

CROP PROTECTION , vol.147, 2021 (SCI-Expanded) Sustainable Development

11. Pan-Mitogenomics Approach Discovers Diversity and Dynamism in the Prominent Brown Rot Fungal Pathogens

Yildiz G., Özkılınç H.

FRONTIERS IN MICROBIOLOGY , vol.12, 2021 (SCI-Expanded)

12. First characterization of the complete mitochondrial genome of fungal plant-pathogen Monilinia laxa which represents the mobile intron rich structure

Yildiz G., ÖZKILINÇ H.

SCIENTIFIC REPORTS , vol.10, no.1, 2020 (SCI-Expanded)

13. Species diversity, mating type assays and aggressiveness patterns ofMoniliniapathogens causing brown rot of peach fruit in Turkey

ÖZKILINÇ H., YILDIZ G., SILAN E., ARSLAN K., GÜVEN H., ALTINOK H. H., et al.

EUROPEAN JOURNAL OF PLANT PATHOLOGY , vol.157, no.4, pp.799-814, 2020 (SCI-Expanded)

14. The most recent status of genetic structure of Didymella rabiei (Ascochyta rabiei) populations in Turkey and the first genotype profile of the pathogen from the wild ancestor, Cicer reticulatum

ÖZKILINÇ H., Can C.

PHYTOPARASITICA , vol.47, no.2, pp.263-273, 2019 (SCI-Expanded) Sustainable Development

15. Molecular phylogenetic species in Alternaria pathogens infecting pistachio and wild relatives

ÖZKILINÇ H., SEVINC U.

3 BIOTECH , vol.8, no.5, 2018 (SCI-Expanded)

16. Contrasting species boundaries between sections Alternaria and Porri of the genus Alternaria

ÖZKILINÇ H., Rotondo F., Pryor B. M., Peever T. L.

PLANT PATHOLOGY , vol.67, no.2, pp.303-314, 2018 (SCI-Expanded)

17. Pathogenicity, Morpho-Species and Mating Types of Alternaria spp. causing Alternaria blight in Pistacia spp. in Turkey

ÖZKILINÇ H., SARPKAYA K., Kurt S., Can C., Polatbilek H., Yasar A., et al.

PHYTOPARASITICA , vol.45, no.5, pp.719-728, 2017 (SCI-Expanded)

18. A NEW DISEASE OF GRASSPEA (LATHYRUS SATIVUS) CAUSED BY ASCOCHYTA LENTIS var. LATHYRI

Infantino A., Zaccardelli M., Costa C., ÖZKILINÇ H., Habibi A., Peever T.

JOURNAL OF PLANT PATHOLOGY , vol.98, no.3, pp.541-548, 2016 (SCI-Expanded) Sustainable Development

19. Population structure and reproductive mode of Didymella fabae in Syria

ÖZKILINÇ H., Thomas K., Abang M., Peever T. L.

PLANT PATHOLOGY , vol.64, no.5, pp.1110-1119, 2015 (SCI-Expanded)

20. Aggressiveness of eight Didymella rabiei isolates from domesticated and wild chickpea native to Turkey and Israel, a case study

ÖZKILINÇ H., Frenkel O., Shtienberg D., Abbo S., Sherman A., Kahraman A., et al.

EUROPEAN JOURNAL OF PLANT PATHOLOGY , vol.131, no.3, pp.529-537, 2011 (SCI-Expanded)

21. Development, characterization and linkage analysis of microsatellite loci for the Ascochyta blight pathogen of faba bean, Didymella fabae

ÖZKILINÇ H., Akamatsu H., Abang M., Thomas K., Chılvers M. I., Peever T. L.

JOURNAL OF MICROBIOLOGICAL METHODS , vol.87, no.1, pp.128-130, 2011 (SCI-Expanded)

22. A comparative study of Turkish and Israeli populations of Didymella rabiei, the ascochyta blight pathogen of chickpea

ÖZKILINÇ H., Frenkel O., Abbo S., Eshed R., Sherman A., Shtienberg D., et al.

PLANT PATHOLOGY , vol.59, no.3, pp.492-503, 2010 (SCI-Expanded)

23. Ecological Genetic Divergence of the Fungal Pathogen Didymella rabiei on Sympatric Wild and Domesticated Cicer spp. (Chickpea)

Frenkel O., Peever T. L., Chilvers M. I., ÖZKILINÇ H., Can C., Abbo S., et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY , vol.76, no.1, pp.30-39, 2010 (SCI-Expanded) Sustainable Development

24. First Report of Ascochyta rabiei Causing Ascochyta Blight of Cicer pinnatifidum

Can C., ÖZKILINÇ H., Kahraman A., Özkan H.

Plant Disease , vol.91, no.7, 2007 (SCI-Expanded)

Articles Published in Other Journals 6

1. Towards Uncovering New Insights into Respiratory Inhibitor Fungicide Resistance in Monilinia Fungal Plant Pathogens: Insights from a Mitogenomic Approach

Arslan K., Durak M. R., Özkilinç H.

TURKISH JOURNAL OF AGRICULTURE: FOOD SCIENCE AND TECHNOLOGY , vol.13, no.6, pp.1577-1589, 2025 (Peer-Reviewed Journal)

2. Molecular phylogeny of Fusarium oxysporum species complex isolated from eggplant and pepper in Turkey

ALTINOK H. H., TANYOLAÇ M. B., Ates D., CAN C., ÖZKILINÇ H.

AGROFOR International Journal , vol.4, no.3, pp.91-99, 2019 (Peer-Reviewed Journal)

3. Characterization of Cryphonectria parasitica From Native Chestnut Trees in Kaz Mountain (Mount Ida)

ÖZKILINÇ H., Kozma Z., Pekdemir B., Gulnar B.

Gaziosmanpaşa Üniversitesi Ziraat Fakültesi Dergisi , vol.35, no.1, pp.38-45, 2018 (Peer-Reviewed Journal) Sustainable Development

4. Molecular Characterization of Natural Fungal Flora in Black Olives: From Field to Table

ÖZSOY N., ÖZKILINÇ H., UYSAL PALA Ç.

Turkish Journal of Agriculture - Food Science and Technology (TURJAF) , no.5, pp.944-949, 2017 (Peer-Reviewed Journal)

5. Molecular identification of Fusarium spp causing wilt of chickpea and the first report of Fusarium redolens in Turkey

TEKEOĞLU M., ÖZKILINÇ H., TUNALI B., KÜSMENOĞLU İ., Chen W.

Mediterranean Agricultural Sciences , vol.30, no.1, pp.27-33, 2017 (Peer-Reviewed Journal)

6. Screening fungicide resistance of Alternaria pathogens causing alternaria blight of pistachio in Turkey Türkiye’de antepfistiği’nda Alternaria yanıklık etmeni alternaria patojenlerinin fungisit direncinin incelenmesi

ÖZKILINÇ H., Kurt S.

Yuzuncu Yil University Journal of Agricultural Sciences , vol.27, no.4, pp.543-549, 2017 (Scopus)

Papers Presented at Peer-Reviewed Scientific Conferences 22

1. A First Approach to Understanding the Role of Repeat Induced Point Mutation (RIP) Dynamics in Fungicide Resistance Evolution in the Monilinia fructicola

Yardimciel E., Özkılınç H.

10th Ecology and Evolutionary Biology Symposium, Çanakkale, Turkey, 23 - 25 July 2024, pp.93, (Summary Text)

2. Genome-wide Predictions of Transcription Factor Binding Sites in the Ancestral DMI-Sensitive and Experimentally Evolved DMI-Resistant Isolates of Monilinia fructicola Pathogen

Cesur A., Özkılınç H.

10th Ecology and Evolutionary Biology Symposium, Çanakkale, Turkey, 23 - 25 July 2024, pp.100, (Summary Text)

3. First step to understand thermal adaptation in the fungal pathogen Monilinia fructicola

Kadıoğlu İ. E., Özkılınç H.

Ecology And Evolutionary Biology Symposium, İstanbul, Turkey, 17 - 19 July 2023, pp.68, (Summary Text) Sustainable Development

4. The First Insights on the Complex Regulations Between ‘miRNAs × lncRNAs’ in Monilinia Fungal Pathogens and Peach Host Interactions

Fidanoğlu B. T., Özkılınç H.

Mechanisms of Intercellular and Inter-Organismal Communication Via RNA, Paris, France, 11 - 12 September 2023, pp.10, (Summary Text)

5. LncRNAs in the Regulation of Cross-Kingdom Interactions: Example from the Monilinia-Peach Pathosystem

Fidanoğlu B. T., Özkılınç H.

Mechanisms of Intercellular and Inter-Organismal Communication Via RNA. COST Action CA20110/exRNA-PATH, Paris, France, 11 - 12 September 2023, pp.9, (Summary Text)

6. A Study on Phylogenies of Homing Endonuclease Genes Found in Mitochondrial Genomes of Monilinia Species

Öncel S., Özkılınç H.

9th. Ecology and Evolutionary Biology Symposium, İstanbul, Turkey, 17 - 19 July 2023, pp.18, (Summary Text)

7. Prediction of Long non-Coding RNAs in Monilinia Fungal Pathogens and First Insights on Mito-LncRNAs

Fidanoğlu B. T., Özkılınç H.

9th Ecology and Evolutionary Biology Symposium, İstanbul, Turkey, 17 - 19 July 2023, pp.32, (Summary Text)

8. Temperature Dependent Infection Risk of Plant Diseases: Peach-Monilinia spp. Pathosystem as a Model

Fidanoğlu B. T., Mestav B., Özkılınç H.

8th Ecology and Evolutionary Biology , Ankara, Turkey, 7 - 09 September 2022, pp.33, (Summary Text)

9. Directed laboratory evolution to induce DMI-fungicide resistance in fungal pathogen.”

Durak M. R., Arslan K., Fidanoğlu B. T., Öncel S., Özkılınç H.

8th Ecology and Evolutionary Biology Symposium, Ankara, Turkey, 7 - 09 September 2022, pp.23, (Summary Text)

10. Mobile Elements in Mitochondrial Genomes of Monilinia Fungal Pathogens

Yıldız G., Özkılınç H.

Ecology and Evolutionary Biology Symposium, İstanbul, Turkey, 16 - 21 August 2021, pp.36, (Summary Text)

11. The Mitochondrial Genome of the Pathogen Monilinia laxa from Peach

Yıldız G., Özkılınç H.

Applied Bioinformatics in Life Sciences, Leuven, Belgium, 13 - 14 February 2020, pp.140, (Summary Text)

12. An overview on Monilinia pathogens the causal agent of brown rot disease of peach considering the pathogen populations from Turkey

Sılan E., Arslan K., Yildiz G., Durak M. R., Özkılınç H.

Fungal Symposium 2019, Kiel, Germany, 2 - 04 September 2019, pp.14, (Summary Text)

20. Population structure and mating system of the faba bean pathogen, Didymella fabae (anamorph: Ascochyta fabae), in Syria

ÖZKILINÇ H., Akamatsu H., Abang M., Thomas K., Chilvers M. I., Peever T. L.

APS Annual Meeting, United States Of America, 1 - 04 August 2011, vol.101, pp.135, (Full Text)

21. Evolutionary history and species boundaries of the citrus brown spot fungus

Stewart J. E., ÖZKILINÇ H., Timmer L., Pryor B. M., Peever T. L.

APS Annual Meeting, United States Of America, 1 - 04 August 2011, vol.101, pp.171, (Full Text)

22. Cicer spp-Didymella rabiei interactions in agricultural and natural ecosystems.

ÖZKILINÇ H., Frenkel O., Abbo S., Shtienberg D., Sherman A., Can C.

5th International Food Legumes Research Conference (IFLRC V) and 7th European Conference on Grain Legumes (AEP VII), Turkey, 1 - 04 April 2010, pp.66, (Summary Text)

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